Data for this project are accessible through Figshare. These include:
Gene count tables derived from SMART-Seq2 RNAseq libraries prepared from individually FACS sorted cells. This includes 53,760 cells from 20 tissues from 8 mice.
Gene count files derived from cells prepared using the 10x Genomics platform and processed with CellRanger. This contains sequence data collected from 422,803 droplet libraries, 55,656 of which passed a QC cutoff of 500 genes and 1000 UMI.
Metadata for single cells (mouse id, sex, FACS setting, etc), along with annotations for the cells.
Robject files for easy loading with the Seurat package, including annotations and clustering for cells from each tissue, prepared from microfluidic droplet-based sequencing libraries or libraries from FACS-sorted cells.
tSNE plots with the expression of the top 10 genes for each tissue projected onto the plot.